Sib-pair Command: numtyp|anytyp|alltyp


ClassAlgebraic operators and function
Namenumtyp | anytyp | alltyp
Arguments

Show number of markers an individual is genotyped at, or indicate whether genotyped at any one or all marker loci.

Example:

>> set loc ntyp qua
Creating new variable "ntyp".
>> set loc atyp aff
Creating new variable "atyp".

>> ntyp=numtyp
Operating on pedigree file
Recoded    231 values.
>> atyp = anytyp
Operating on pedigree file
Recoded    231 values.

>> tab ntyp atyp
------------------------------------------------
Cross-tabulation of "ntyp" ... "atyp"
------------------------------------------------
                      atyp
ntyp               n            y
           --------------------------
   0.00000      5 (1.00)     0 (.000)
   1.00000      0 (.000)     2 (1.00)
   2.00000      0 (.000)     3 (1.00)
   3.00000      0 (.000)     3 (1.00)
   4.00000      0 (.000)     3 (1.00)
   5.00000      0 (.000)     2 (1.00)
   6.00000      0 (.000)     8 (1.00)
   7.00000      0 (.000)    22 (1.00)
   8.00000      0 (.000)   183 (1.00)

Sib-pair Command: male|female|isfou|isnon


ClassAlgebraic operators and function
Namemale | female | isfou | isnon
Arguments

Test sex or founder status of individual.

Example:

>> count male

Count where "male":

Pedigree       Con=T   Num  ASPs Trios    4+
-------------- ----- ----- ----- ----- -----
         Total    96   231    13     1     0

Number of matched persons   =   96 out of   231 (41.6%)
Number of matched pedigrees =   54 out of    54 (100.0%)


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